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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902363.1_cds_XP_016452404.1_46648
CDS Infomation

[gene=LOC107776959] [db_xref=GeneID:107776959] [protein=protein RIK-like] [protein_id=XP_016452404.1] [location=join(12682..12854,14034..14250,14665..14763,14871..14905,14987..15062,15826..15921,15998..16084,16604..16697,16845..16962,17114..17636,19891..20128,20513..20640)] [gbkey=CDS]
Sequence

ATGCGTCTGAAATCTTTGTTTGTGGGAAACTTATTCATTCTTCGCTCTGTTGAATCAAAA
GAAGCATTGCAATCGAACGAACTAGAAATTTTGTCAGCAATGACGGAGGATAATTGCCCT
AGAGTTTCATCTTCCGAATCTTTAGACTCCAATTCTTCATCCCCGAAGCAAAGGAAGAGG
AGAAAGTGGGATCAGCCTGCGGAGACATTTGTTCCAGATGGAGTAGCAGTATCTGGGATT
TTTCCATTGGCACACATGGGATCTTTTGCTGGTGTCCCATTACCTGGTGTAGCTCCAGTC
TTAGGTGCTGCTTTTGTGAATCCTCTTACCGCTATTGGTGCTACTACAGTGCAGCAGCAT
CCTCTCATTGTTGCCCAAAAATTAATTCAACCAAAAATTCAGGATGAGTTGATAGCAAGA
GAAATTGTCATTAATGACGCTGATCCGGCTGTTCGTTACAGGCTCACAAAGCGCCAAACC
CAGGAAGAGATTCAGAAGAGCTCGGGCGCTGTGGTTATAACTAGGGGTAGATACAGGCCT
CCAAACGCACCATCTGATGGTGAAAAACCCCTCTACCTTCATATTTCTGCTGGGGCACAT
CTAGAAACAACACTGGAGAGGATTAAAGCAGTTGATCGTGCTGCCGCTATAGTGGAGGAA
ATGCTGAAGCAAGGTACTGTTAACAATGGATTGAAGGTCAATCATCTGCTTAGCACCTGT
GTCTACCTGGGCTTTGAGGCTGATCCATCAGCAAATATTGCTGCTCGAATTCGTGGACCA
AATGATCAGTATATAAATCACATTATAAATGAAACTGGATCGACTGTCTTGCTAAGAGGG
CGTGGTTCGGGATATTCAGACGGAGGACAGGGTGAAGATGTGCACCAACCTCTGCATTTA
ATCATATCAAACAATAACAGTGCAAGTCTTGAGCGCGCAAAGCTTTTGGCAGAAAATCTT
TTGGATACTATTTGTGCGGAGTGTGGTGCTTCTAGAGTCTCTTCTTGTAAGGTTTATGGT
GCTGTTCCCCCTCCACCACAACCGTTAGCCAGCAGTCAGAGTTCTGGAAGTGAATCAGAA
GTCAATAGCATACCTGCAGCCAATGTAGCTGCACAGATTCTGAGCTCCACAACAGCAGCA
GCAGTTCCCGTGACTGCAGCTGCAGGCGTGACTAATGTTGTTTCTCACAGTACATTGCCT
CAACCTCAACCTGTAGGTTCTCTGAATCCTGTGCCATCTCAACCTCCCACCGGTTGCTAT
CCTCATCAATTAGTTACAAGCAGAACAAGCTATATTGGTTATGATGGTATATATCCACAA
GTCACTCCTCTGCAGCAAGTTGCTTTGGCTCTTAGGAATTCTACTTCTCCAGTCACCGCC
ACAGTTGCTCCAGCTACAACAGGAGCAAGCATCACTTCACAGACAAGTATAGGTTCTGAG
AAGGAGAAGCGTCCTGCACAGAAGCGTAAATTTCAGGAGCTGCCGGCTGCTGGAAAGGGC
CAAGCAACTGTAAACCAGAATTCATTGCAGGGTTCAGAGCTCCCAACGCCTCAGGATCGA
ATGTTAGACGCAGGTTATCGATGCAACATTGGAGCGACTCCGAAAAAGTTGGTTCAGCCA
TTATCCAGTCCGATGCCACCGCCACCTCCTAGGATGATGCCTCCTCCACCACCACCACCA
CCAAAGTTTCATTCATCAACAGAGAAAGTGCATGCCAACAATGTAGCTCACAAAACACCA
TGTAAAATTGTTCCAGATACTTTAGTCCAGCTAATGGAATATGGGGATGATGATGACGAT
GATGACACTGATGAAGCAATTGACAGACCTTTGAAAAGCAGCTCAAATGTGTTAGCAGCT
CCGAAACCATTCTGGGCTGTTTAA

Peptide Sequence

PEP ID

XP_016452404.1
PEP Infomation

PREDICTED: protein RIK-like [Nicotiana tabacum]
Sequence

MRLKSLFVGNLFILRSVESKEALQSNELEILSAMTEDNCPRVSSSESLDSNSSSPKQRKR
RKWDQPAETFVPDGVAVSGIFPLAHMGSFAGVPLPGVAPVLGAAFVNPLTAIGATTVQQH
PLIVAQKLIQPKIQDELIAREIVINDADPAVRYRLTKRQTQEEIQKSSGAVVITRGRYRP
PNAPSDGEKPLYLHISAGAHLETTLERIKAVDRAAAIVEEMLKQGTVNNGLKVNHLLSTC
VYLGFEADPSANIAARIRGPNDQYINHIINETGSTVLLRGRGSGYSDGGQGEDVHQPLHL
IISNNNSASLERAKLLAENLLDTICAECGASRVSSCKVYGAVPPPPQPLASSQSSGSESE
VNSIPAANVAAQILSSTTAAAVPVTAAAGVTNVVSHSTLPQPQPVGSLNPVPSQPPTGCY
PHQLVTSRTSYIGYDGIYPQVTPLQQVALALRNSTSPVTATVAPATTGASITSQTSIGSE
KEKRPAQKRKFQELPAAGKGQATVNQNSLQGSELPTPQDRMLDAGYRCNIGATPKKLVQP
LSSPMPPPPPRMMPPPPPPPPKFHSSTEKVHANNVAHKTPCKIVPDTLVQLMEYGDDDDD
DDTDEAIDRPLKSSSNVLAAPKPFWAV

Transcript Sequence

Gene sequence data has not been registered.